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Photochemical nucleic acid-labeling reagent having a polyalkylamine spacer

Assignee: MILES INC. A CORP. OF INDIANA
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Filing: 1987-03-18
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Granted: 1990-08-21
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Expires: 2007-03-18
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Abstract

Abstract A photochemical nucleic acid-labeling reagent of the formula <IMAGE> wherein Q is a photoreactive residue of a nucleic acid-binding ligand; L is a detectable label residue; R is hydrogen, C1 to C7-alkyl, aryl, hydroxy, or C1 to C7-alkoxy; x is an integer from 2 through 7; and y is an integer from 3 through 10; wherein R and x, respectively, can be the same or different each time they appear in the formula. The reagent is useful in the highly efficient labeling of nucleic acids for the purpose of detection in hybridization assays.

Inventors

  • 👤 Nanibhushan Dattagupta
  • 👤 James P. Albarella

Bibliographic Details

Application Number —
Jurisdiction US
Data Source google_patents
Last Synchronized 2026-10-30 09:22
CPC Classifications
C; C12; C12Q; C12Q1/00; C12Q1/68; C12Q1/6813; C12Q1/6816; G; G01; G01N; G01N33/00; G01N33/48; G01N33/50; G01N33/53; G01N33/531; G01N33/532; Y; Y10; Y10T; Y10T436/00; Y10T436/14; Y10T436/142222; Y10T436/143333

Claims Analysis

Total Claims: 29
Claim 1
Independent Claim 60 words
A photochemical nucleic acid-labeling reagent of the formula ##STR11## wherein Q is a photoreactive residue of a nucleic acid-binding ligand; L is a detectable label residue; R is hydrogen, C 1 to C 7 -alkyl, aryl, hydroxy, or C 1 to C 7 -alkoxy; and wherein R can be the same or different each time R appears in the formula.
Claim 2
Dependent Claim 60 words
A photochemical nucleic acid-labeling reagent of the formula ##STR11## wherein Q is a photoreactive residue of a nucleic acid-binding ligand; L is a detectable label residue; R is hydrogen, C 1 to C 7 -alkyl, aryl, hydroxy, or C 1 to C 7 -alkoxy; and wherein R can be the same or different each time R appears in the formula.
Claim 3
Dependent Claim 17 words
A reagent according to claim 1, wherein R is hydrogen or C 1 to C 4 -alkyl.
Claim 4
Dependent Claim 10 words
A reagent according to claim 1 of the formula ##STR12##
Claim 5
Dependent Claim 23 words
A reagent according to claim 1, wherein the photoreactive residue of a nucleic acid-binding ligand is a photoreactive residue of an intercalator compound.
Claim 6
Dependent Claim 26 words
A reagent according to claim 4, wherein the intercalator compound is selected from the group consisting of acridine dyes, phenanthridines, phenazines, furocoumarins, phenothiazines, quinolines and antracyclines.
Claim 7
Dependent Claim 20 words
A reagent according to claim 4, wherein the intercalator compound is selected from the group consisting of furocoumarins and phenanthridines.
Claim 8
Dependent Claim 67 words
A reagent according to claim 4, wherein the intercalator compound is of the formula ##STR13## in which R 1 , R 2 and R 3 each independently is hydrogen or C 1 -C 7 -alkyl; and R 4 is hydrogen, C 1 -C 7 -alkyl or C 1 -C 7 -alkyl substituted with hydroxy, C 1 -C 7 -alkoxy, amino, halo, or is of the formula ##STR14##
Claim 9
Dependent Claim 12 words
A reagent according to claim 4, wherein the intercalator compound is 4'-aminomethyl-4,5'-dimethylangelicin.
Claim 10
Dependent Claim 88 words
A reagent according to claim 4, wherein the intercalator compound is of the formula ##STR15## in which R 1 , R 3 and R 6 each independently is hydrogen or C 1 -C 7 -alkyl; R 4 is hydrogen, C 1 -C 7 -alkyl or C 1 -C 7 -alkyl substituted with hydroxy, C 1 -C 7 -alkoxy, amino, halo, or is of the formula ##STR16## R 2 and R 5 each independently is hydrogen, hydroxy, carboxy, carbo-C 1 -C 7 -alkoxy or C 1 -C 7 -alkoxy.
Claim 11
Dependent Claim 12 words
A reagent according to claim 4, wherein the intercalator compound is 4'-aminomethyl-4,5',8-trimethylpsoralen.
Claim 12
Dependent Claim 35 words
A reagent according to claim 1, wherein the detectable label residue is a residue of a moiety selected from the group consisting of biotin, a hapten, an enzyme, a fluorescent molecule and a luminescent molecule.
Claim 13
Dependent Claim 24 words
A reagent according to claim 1, wherein the detectable label residue is selected from the group consisting of a biotin and a hapten residue.
Claim 14
Dependent Claim 73 words
A labeled nucleic acid comprising (a) a nucleic acid component, (b) a nucleic acid-binding ligand photochemically linked to the nucleic acid component, (c) a label, and (d) a spacer chemically linking (b) and (c) and being of the formula ##STR17## wherein R is hydrogen, C 1 -C 7 alkyl, aryl, hydroxy, or C 1 -C 7 alkoxy; and wherein R can be the same or different each time R appears in the formula.
Claim 15
Dependent Claim 73 words
A labeled nucleic acid comprising (a) a nucleic acid component, (b) a nucleic acid-binding ligand photochemically linked to the nucleic acid component, (c) a label, and (d) a spacer chemically linking (b) and (c) and being of the formula ##STR17## wherein R is hydrogen, C 1 -C 7 alkyl, aryl, hydroxy, or C 1 -C 7 alkoxy; and wherein R can be the same or different each time R appears in the formula.
Claim 16
Dependent Claim 18 words
A labeled nucleic acid according to claim 13, wherein R is hydrogen or C 1 -C 4 alkyl.
Claim 17
Dependent Claim 16 words
A labeled nucleic acid according to claim 13, wherein the spacer is of the formula ##STR18##
Claim 18
Dependent Claim 17 words
A labeled nucleic acid according to claim 13, wherein the nucleic acid-binding ligand is an intercalator compound.
Claim 19
Dependent Claim 28 words
A labeled nucleic acid according to claim 16, wherein the intercalator compound is selected from the group consisting of acridine dyes, phenanthridines, phenazines, furocoumarins, phenothiazines, quinolines and anthracyclines.
Claim 20
Dependent Claim 22 words
A labeled nucleic acid according to claim 16, wherein the intercalator compound is selected from the group consisting of furocoumarins and phenanthridines.
Claim 21
Dependent Claim 66 words
A labeled nucleic acid according to claim 16, wherein the intercalator compound is of the formula ##STR19## in which R 1 , R 2 and R 3 each independently is hydrogen or lower alkyl; and R 4 is hydrogen, C 1 -C 7 -alkyl or C 1 -C 7 -alkyl substituted with hydroxy, C 1 -C 7 -alkoxy, amino, halo, or is of the formula ##STR20##
Claim 22
Dependent Claim 14 words
A labeled nucleic acid according to claim 16, wherein the intercalator compound is 4'-aminomethyl-4,5'-dimethylangelicin.
Claim 23
Dependent Claim 90 words
A labeled nucleic acid according to claim 16, wherein the intercalator compound is of the formula ##STR21## in which R 1 , R 3 and R 6 each independently is hydrogen or C 1 -C 7 -alkyl; R 4 is hydrogen, C 1 -C 7 -alkyl or C 1 -C 7 -alkyl substituted with hydroxy, C 1 -C 7 -alkoxy, amino, halo, or is of the formula ##STR22## R 2 and R 5 each independently is hydrogen, hydroxy, carboxy, carbo-C 1 -C 7 -alkoxy or C 1 -C 7 -alkoxy.
Claim 24
Dependent Claim 14 words
A labeled nucleic acid according to claim 16, wherein the intercalator compound is 4'-aminomethyl-4,5'-8-trimethylpsoralen.
Claim 25
Dependent Claim 30 words
A labeled nucleic acid according to claim 13, wherein the label is selected from the group consisting of biotin, a hapten, an enzyme, a fluorescent molecule and a luminescent molecule.
Claim 26
Dependent Claim 22 words
A labeled nucleic acid according to claim 13, wherein the label is selected from the group consisting of biotin and a hapten.
Claim 27
Dependent Claim 15 words
A labeled nucleic acid according to claim 13, wherein the nucleic acid component is DNA.
Claim 28
Dependent Claim 15 words
A labeled nucleic acid according to claim 13, wherein the nucleic acid component is RNA.
Claim 29
Dependent Claim 16 words
A labeled nucleic acid according to claim 13, wherein the nucleic acid component is an oligonucleotide.

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USPTO Annuity & Maintenance Windows

Annuity Stage Window Opens Payment Deadline Surcharge Period Until Estimated Fee Status
3.5 Years (Year 4) 1993-08-20 1994-02-19 1994-08-21 $2000.00 Window Closed / Lapsed
7.5 Years (Year 8) 1997-08-20 1998-02-19 1998-08-21 $3760.00 Window Closed / Lapsed
11.5 Years (Year 12) 2001-08-20 2002-02-19 2002-08-21 $7700.00 Window Closed / Lapsed

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