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EP0731178A2 Expired / Lapsed EP ⏱️ 0.0 years remaining

Method of measuring oligonucleotide decomposition

Assignee: Hamamatsu Photonics KK
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Filing: 1996-03-08
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Granted: —
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Expires: 2016-03-08
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Abstract

Abstract The present invention provides an in situ monitoring of the decomposing activity against oligonucleotides target in a biological tissue. A single-chain oligonucleotide target comprises an appropriate number of nucleic acid bases to be examined with an energy donor and an energy acceptor respectively at its 5'- and 3'-terminals. Monitoring of the fluorescence changes of the target after injection into a biological tissue, particularly the fluorescent resonance energy transfer(FRET) phenomena between the energy donor and acceptor, indicates whether the oligonucleotide is not decomposed yet.

Inventors

  • 👤 Hisatoshi Uchiyama
  • 👤 Masaki Jibu
  • 👤 Kenichi Hirano
  • 👤 Kazunari Taira

Bibliographic Details

Application Number —
Jurisdiction EP
Data Source google_patents
Last Synchronized 2026-10-29 20:55
CPC Classifications
C; C07; C07H; C07H21/00; C12; C12Q; C12Q1/00; C12Q1/68; C12Q1/6813; C12Q1/6816; C12Q1/6818

Claims Analysis

Total Claims: 11
Claim 1
Independent Claim 59 words
A method of monitoring the cleavage of an oligonucleotide comprising the steps of; a) detecting a resonance energy transfer caused by an energy donor group and an energy acceptor group combined with the oligonucleotide, b) detecting a change in the resonance energy transfer resulting from decomposition of the oligonucleotide between the energy donor group and the energy acceptor group.
Claim 2
Dependent Claim 26 words
A method according to claim 1, wherein the energy donor group and the energy acceptor group are combined with the 5'- and 3'-terminals of the oligonucleotide.
Claim 3
Dependent Claim 17 words
A method according to claim 1 or claim 2, wherein the fluorescence energy transfer (FRET) is detected.
Claim 4
Dependent Claim 23 words
A method according to claim 3, wherein the energy donor group contains a fluorescein fluorochrome and the energy acceptor contains a rhodamine fluorochrome.
Claim 5
Independent Claim 31 words
A method according to any preceding claim, wherein the oligonucleotide between the energy donor group and the energy acceptor group comprises not less than 3 but not more than 20 nucleotides.
Claim 6
Independent Claim 27 words
A method according to any one of claims 1 to 4, wherein the oligonucleotide between the energy donor group and the energy acceptor group comprises 10 nucleotides.
Claim 7
Independent Claim 12 words
A method according to any preceding claim wherein the oligonucleotide is single-stranded.
Claim 8
Independent Claim 67 words
A method of measuring a decomposing activity against a subject oligonucleotide comprising the steps of detecting a resonance energy transfer caused by a set of energy donor group and energy acceptor group combined with said subject oligonucleotide and then detecting a change in said resonance energy transfer resulting from a decomposition reaction of an oligonucleotide chain between said set of energy donor group and energy acceptor group.
Claim 9
Independent Claim 60 words
A method of measuring a decomposing activity against a subject single-chain oligonucleotide comprising the steps of detecting a resonance energy transfer caused by a set of energy donor group and energy acceptor group combined with 5'- and 3'-terminals of said subject oligonucleotide and then detecting a change in said resonance energy transfer resulting from a decomposition reaction of said oligonucleotide.
Claim 10
Independent Claim 71 words
A method of measuring a decomposing activity against a subject oligonucleotide comprising the steps of detecting a fluorescence resonance energy transfer (FRET) caused by a set of energy donor group and energy acceptor group combined with said subject oligonucleotide and then detecting a change in said fluorescence resonance energy transfer (FRET) resulting from a decomposition reaction of an oligonucleotide chain between said set of energy donor group and energy acceptor group.
Claim 11
Independent Claim 64 words
A method of measuring a decomposing activity against a subject single-chain oligonucleotide comprising the steps of detecting a fluorescence resonance energy transfer (FRET) caused by a set of energy donor group and energy acceptor group combined with 5'- and 3'-terminals of said subject oligonucleotide and then detecting a change in said fluorescence resonance energy transfer (FRET) resulting from a decomposition reaction of said oligonucleotide.

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